Publications
Publications de LAMY Jean-Baptiste
Publication de type "Rapport"
| 2016 |
| 1. | Lamy JB, Berthelot H, Ugon A, Kraiem L, Badra F, Duclos C, Venot A "Rapport scientifique du projet VIIIP (Visualisation Intégrée de l'Information sur l'Innovation Thérapeutique)" 2016 |
Publications de type "Communication dans un congrès"
| 2017 |
| 2. | Lamy JB, Tsopra R "Translating visually the reasoning of a perceptron: the weighted rainbow boxes technique and an application in antibiotherapy" 2017 International Conference Information Visualisation (iV) Londres |
| 3. | Lamy JB, Ugon A, Duclos C, Venot A, Favre M, Berthelot H "Une plate-forme visuelle pour une information comparative sur les nouveaux médicaments" 2017 Ingénierie des Connaissances (IC) Caen France |
| 4. | Lamy JB "Les oiseaux picorant artificiels : une nouvelle méta-heuristique inspirée du comportement des pigeons" 2017 Caen |
| 5. | Lamy JB , Ugon A, Duclos C, Venot A, Berthelot H, Favre M, Lamas E, Lamy JB "Une plate-forme visuelle pour une information comparative sur les nouveaux médicaments" 2017 Ingénierie des Connaissances (IC) 2017 Caen |
| 2016 |
| 6. | Kouame A, Brou KM, Lo M, Lamy JB "Vers un système iconique d’aide à la décision pour les praticiens de la médecine traditionnelle" Colloque Africain sur la Recherche en Informatique et Mathématiques (CARI 2016) 2016 |
| 7. | Kouamé A, Lamy JB, Brou KM, Lo M "Modelization of recipe in African traditional medicine with visual ontology approach, iconic sketch" Africomm conference 2016 accepté |
| 8. | Lamy JB, Berthelot H, Favre M "Rainbow boxes: a technique for visualizing overlapping sets and an application to the comparison of drugs properties" 2016 International Conference Information Visualisation 2016 Lisbonne Portugal |
| 9. | Lamy JB, Berthelot H, Favre M "Les boîtes arc-en-ciel : une nouvelle technique pour visualiser les relations d'instanciation dans les ontologies et son application à la comparaison des propriétés des médicaments" 2016 Conférence Nationale en Intelligence Artificielle (CNIA) Clermont-Ferrand France |
| 2015 |
| 10. | Lamy JB, Ugon A, Favre M, Duclos C, Venot A, Berthelot H "Comparaison et visualisation des contre-indications des médicaments" 2015 3ème Symposium Ingénierie de l’Information Médicale (SIIM 2015) Rennes France |
| 11. | Lamy JB, Berthelot H "Ontopy : programmation orientée ontologie en Python" 2015 IC2015 Rennes France |
| 12. | Lamy JB, Venot A, Duclos C "PyMedTermino - an open-source generic API for advanced terminology services." MIE 2015 924-928 |
| 2014 |
| 13. | Lamy JB, Soualmia L, Venot A, Duclos C "Validation de la sémantique d'un langage iconique médical à l'aide d'une ontologie : méthodes et applications" 2014 51-62 IC - 25èmes Journées francophones d'Ingénierie des Connaissances Clermont-Ferrand France |
| 14. | Simon C, Hassler S, Beuscart-Zéphir MC, Favre M, Venot A, Duclos C, Lamy JB "Using an Iconic Language to Improve Access to Electronic Medical Records in General Medicine." MIE 2014 333-337 |
| 15. | Sedki K, Duclos C, Lamy JB "A Preference-based framework for medical decision making." MIE 2014 63-67 |
| 16. | Vaillant P, Lamy JB "Using Graph Transformation Algorithms to Generate Natural Language Equivalents of Icons Expressing Medical Concepts." TSD 2014 353-362 |
| 2013 |
| 17. | Lamy JB, Tsopra R, Venot A, Duclos C "A Semi-automatic Semantic Method for Mapping SNOMED CT Concepts to VCM Icons." MedInfo 2013 42-46 |
| 2012 |
| 18. | Lamy JB, Beuscart-Zéphir MC, Boog C, Darmoni S, Favre M, Guigue L, Pinaud N, Hamek S, Hassler S, Kerdelhué G et al. "Langage Iconique et Interfaces Interactives pour la Médecine" Colloque ANR TecSan 2012 |
| 19. | Lamy JB, Venot A, Duclos C "VCM - an iconic and compositional representation of medical concepts." AMIA 2012 |
| 20. | Tsopra R, Lamy JB, Venot A, Duclos C "Design of an original interface that facilitates the use of clinical practice guidelines of infection by physicians in primary care." MIE 2012 93-97 |
| 2011 |
| 21. | Yasini M, Duclos C, Lamy JB, Venot A "Facilitating Access to Laboratory Guidelines by Modeling their Contents and Designing a Computerized User Interface." MIE 2011 487-491 |
| 2009 |
| 22. | Lamy JB, Duclos C, Venot A "De l'analyse d'un corpus de texte à la conception d'une interface graphique facilitant l'accès aux connaissances sur le médicament." Actes d'IC 2009 265-276 |
| 2008 |
| 23. | Lamy JB, Duclos C, Venot A "Quelles applications pédagogiques pour un langage graphique médical ?" Congrès Internet et Pédagogie pour les Sciences de la Santé et du Sport (IP3S2008) 2008 |
| 2006 |
| 24. | Lamy JB, Duclos C, Rialle V, Venot A "Vers une méthode rigoureuse de conception des langages graphiques s’appuyant sur les sciences cognitives" 4ème atelier visualisation et extraction de connaissances, 6èmes journées francophones d’Extraction et de Gestion des Connaissances 2006 |
| 2005 |
| 25. | Lamy JB, Duclos C, Rialle V, Venot A "Classification et analyse critique des approches graphiques appliquées à la visualisation des connaissances médicales" Journées Francophones d’Informatique Médicale (JFIM2005) 2005 1-9 |
| 2004 |
| 26. | Lamy JB, Duclos C, Rialle V, Venot A "Quelles approches graphiques pour faciliter la diffusion des connaissances médicales ?" 5ème congrès Internet et Pédagogie Médicale (IPM 2004) 2004 39-40 |
Publications de type "Poster"
| 2014 |
| 27. | Lamy JB, Berthelot H, Favre M, Venot A, Duclos C "Toward an Ontology-Based system for the Automatic Detection of Biases and Weaknesses in Drug Clinical Trial Results." MIE 2014 1197 |
| 2010 |
| 28. | Kerdelhué G, Lamy JB, Venot A, Duclos C, Darmoni S "An iconic language for the ’CISMeF Bonnes pratiques’ website" Poster EAHIL conference 2010 |
Publications de type "Thèse et mémoire"
| 2006 |
| 29. | Lamy JB "Conception et évaluation de méthodes de visualisation des connaissances médicales : Mise au point d’un langage graphique et application aux connaissances sur le médicament" 2006 |
| 2003 |
| 30. | Lamy JB "Reconnaissance de scénarios, application à la télé-surveillance médicale à domicile" 2003 |
| 2002 |
| 31. | Lamy JB "Télé-surveillance médicale: conception d’un système d’analyse temporelle, validation par simulation et reconstitution par réalité virtuelle" 2002 |
Publications de type "Chapitre d'ouvrage"
| 2017 |
| 32. | Lamy JB, Ugon A, Berthelot H, Favre M "A visual decision support system for helping physicians to make a decision on new drugs" Lecture Notes in Business Information Processing 2017 Decision Support Sys:3-15 |
| 2014 |
| 33. | Duclos C, Burgun A, Lamy JB, Landais P, Rodrigues JM, Soualmia L, Zweigenbaum P "Medical Vocabulary, Terminological Resources and Information Coding in the Health Domain" Medical Informatics, e-Health - Fundamentals and Applications 2014 11-42 |
| 2012 |
| 34. | Duclos C, Burgun A, Lamy JB, Landais P, Rodrigues JM, Soualmia L, Zweigenbaum P "Le vocabulaire médical, les ressources terminologiques, le codage de l'information en santé" Informatique Médicale, e-Santé - Fondements et applications 2012 |
| 2010 |
| 35. | Lamy JB, Ellini A, Nobécourt J, Venot A, Zucker JD "Testing methods for decision support systems" Decision support systems 2010 87-98 |
Publications de type "Article indexé dans PubMed ou WOS en informatique ou informatique médicale"
| 2022 |
| 36. | Mouazer A, Leguillon R, Leroy B, Sedki K, Simon C, Falcoff H, Schuers M, Dubois S, Bousquet C, Soualmia L et al. "ABiMed: Towards an Innovative Clinical Decision Support System for Medication Reviews and Polypharmacy Management." Studies in health technology and informatics 2022 289:61-64 |
| 2020 |
| 37. | Bouaud J, Pelayo S, Lamy JB, Prebet C, Ngo C, Teixeira L, Guézennec G, Séroussi B "Implementation of an ontological reasoning to support the guideline-based management of primary breast cancer patients in the DESIREE project." Artificial intelligence in medicine 2020 108:101922 |
| 38. | Pelayo S, Bouaud J, Blancafort C, Lamy JB, Sekar BD, Larburu N, Muro N, Ribate AU, Belloso J, Valderas G et al. "Preliminary Qualitative and Quantitative Evaluation of DESIREE, a Decision Support Platform for the Management of Primary Breast Cancer Patients." AMIA ... Annual Symposium proceedings. AMIA Symposium 2020 2020:1012-1021 |
| 2019 |
| 39. | Lamy JB, Sekar B, Guezennec G, Bouaud J, Séroussi B "Explainable artificial intelligence for breast cancer: A visual case-based reasoning approach." Artificial intelligence in medicine 2019 94:42-53 |
| 2018 |
| 40. | Ugon A, Hadj Bouzid AI, Jaulent MC, Favre M, Duclos C, Jobez E, Falcoff H, Lamy JB, Tsopra R "Building a Knowledge-Based Tool for Auto-Assessing the Cardiovascular Risk." Studies in health technology and informatics 2018 247:735-739 |
| 2017 |
| 41. | Lamy JB, Soualmia L "Formalization of the semantics of iconic languages: An ontology-based method and four semantic-powered applications" Knowledge-Based Systems 2017 135:159 - 179 |
| 42. | Lamy JB "Owlready: Ontology-oriented programming in Python with automatic classification and high level constructs for biomedical ontologies" Artificial Intelligence Medicine 2017 80C:11-28 |
| 43. | Lamy JB, Berthelot H, Capron C, Favre M "Rainbow boxes: a new technique for overlapping set visualization and two applications in the biomedical domain" Journal of Visual Language and Computing 2017 |
| 44. | Tsopra R, Kinouani S, Venot A, Jaulent MC, Duclos C, Lamy JB "Design of a Visual Interface for Comparing Antibiotics Using Rainbow Boxes." Studies in health technology and informatics 2017 235:529-533 |
| 45. | Séroussi B, Guézennec G, Lamy JB, Muro N, Larburu N, Sekar BD, Prebet C, Bouaud J "Reconciliation of multiple guidelines for decision support: a case study on the multidisciplinary management of breast cancer within the DESIREE project." AMIA ... Annual Symposium proceedings. AMIA Symposium 2017 2017:1527-1536 |
| 2016 |
| 46. | Lamy JB, Soualmia LF, Duclos C, Venot A "Formalisation de la sémantique des langages iconiques : méthode à base d'ontologie et applications" Revue d’intelligence artificielle (RIA) 2016 30:579-606 |
| 47. | Lamy JB, Ugon A, Berthelot H "Automatic Extraction of Drug Adverse Effects from Product Characteristics (SPCs): A Text Versus Table Comparison." Studies in health technology and informatics 2016 228:339-43 |
| 48. | Lamy JB "Ontology-Oriented Programming for Biomedical Informatics." Studies in health technology and informatics 2016 221:64-8 |
| 2015 |
| 49. | Lamy JB, Séroussi B, Griffon N, Kerdelhué G, Jaulent MC, Bouaud J "Toward a formalization of the process to select IMIA Yearbook best papers." Methods of information in medicine 2015 54:135-44 |
| 50. | Ugon A, Berthelot H, Venot A, Favre M, Duclos C, Lamy JB "Abstractive Summarization of Drug Dosage Regimens for Supporting Drug Comparison." Studies in health technology and informatics 2015 213:79-82 |
| 51. | Lamy JB, Venot A, Duclos C "PyMedTermino: an open-source generic API for advanced terminology services." Studies in health technology and informatics 2015 210:924-8 |
| 2014 |
| 52. | Griffon N, Kerdelhué G, Hamek S, Hassler S, Boog C, Lamy JB, Duclos C, Venot A, Darmoni SJ "Design and usability study of an iconic user interface to ease information retrieval of medical guidelines." Journal of the American Medical Informatics Association : JAMIA 2014 21:e270-7 |
| 53. | Vaillant Pascal, Lamy Jean-Baptiste "Using graph transformation algorithms to generate natural language equivalents of icons expressing medical concepts" Lecture Notes in Artificial Intelligence 2014 LNAI 8655, ISBN-13 9:353–362 TSD 2014 Brno République Tchèque |
| 54. | Pereira S, Hassler S, Hamek S, Boog C, Leroy N, Beuscart-Zéphir MC, Favre M, Venot A, Duclos C, Lamy JB et al. "Improving access to clinical practice guidelines with an interactive graphical interface using an iconic language." BMC medical informatics and decision making 2014 14:77 |
| 55. | Bouaud J, Lamy JB "A 2014 medical informatics perspective on clinical decision support systems: do we hit the ceiling of effectiveness?" Yearbook of medical informatics 2014 9:163-6 |
| 56. | Griffon N, Kerdelhué G, Soualmia LF, Merabti T, Grosjean J, Lamy JB, Venot A, Duclos C, Darmoni SJ "Evaluating alignment quality between iconic language and reference terminologies using similarity metrics." BMC medical informatics and decision making 2014 14:17 |
| 57. | Simon C, Hassler S, Beuscart-Zephir MC, Favre M, Venot A, Duclos C, Lamy JB "Using an iconic language to improve access to electronic medical records in general medicine." Studies in health technology and informatics 2014 205:333-7 |
| 58. | Sedki K, Duclos C, Lamy JB "A Preference-based framework for medical decision making." Studies in health technology and informatics 2014 205:63-7 |
| 2013 |
| 59. | Lamy JB, Soualmia LF, Kerdelhué G, Venot A, Duclos C "Validating the semantics of a medical iconic language using ontological reasoning." Journal of biomedical informatics 2013 46:56-67 |
| 60. | Bouaud J, Lamy JB, Section Editors for the IMIA Yearbook Section on Decision Support "A medical informatics perspective on clinical decision support systems. Findings from the yearbook 2013 section on decision support." Yearbook of medical informatics 2013 8:128-31 |
| 61. | Yasini M, Duclos C, Venot A, Lepage E, Lamy JB "A guideline-derived model to facilitate the implementation of test-ordering rules within a hospital information system." Studies in health technology and informatics 2013 192:719-23 |
| 62. | Lamy JB, Tsopra R, Venot A, Duclos C "A semi-automatic semantic method for mapping SNOMED CT concepts to VCM Icons." Studies in health technology and informatics 2013 192:42-6 |
| 63. | Yasini M, Ebrahiminia V, Duclos C, Venot A, Lamy JB "Comparing the use of SNOMED CT and ICD10 for coding clinical conditions to implement laboratory guidelines." Studies in health technology and informatics 2013 186:200-4 |
| 64. | Ebrahiminia V, Yasini M, Lamy JB "Mapping ASTI patient's therapeutic-data model to virtual Medical Record - can VMR represent therapeutic data elements used by ASTI in clinical guideline implementations?" AMIA 2013 |
| 2012 |
| 65. | Tsopra R, Lamy JB, Venot A, Duclos C "Design of an original interface that facilitates the use of clinical practice guidelines of infection by physicians in primary care." Studies in health technology and informatics 2012 180:93-7 |
| 66. | Lamy JB, Beuscart-Zéphir MC, Boog C, Darmoni S, Favre M, Guigue L, Hamek S, Hassler S, Kerdelhué G, Leroy N et al. "Langage iconique et interfaces interactives en médecine : application aux dossiers patients, guides de bonnes pratiques et moteurs de recherche médicaux" IRBM 2012 33:129-136 |
| 2011 |
| 67. | Lamy JB, Ebrahiminia V, Seroussi B, Bouaud J, Simon C, Favre M, Falcoff H, Venot A "A generic system for critiquing physicians' prescriptions: usability, satisfaction and lessons learnt." Studies in health technology and informatics 2011 169:125-9 |
| 68. | Yasini M, Duclos C, Lamy JB, Venot A "Facilitating access to laboratory guidelines by modeling their contents and designing a computerized user interface." Studies in health technology and informatics 2011 169:487-91 |
| 69. | Bencherif S, Khau S, Bloede F, Lamy JB, Falcoff H "Adaptation du traitement chez les patients hypertendus" Exercer 2011 22:88 |
| 2010 |
| 70. | Lamy JB, Ebrahiminia V, Riou C, Seroussi B, Bouaud J, Simon C, Dubois S, Butti A, Simon G, Favre M et al. "How to translate therapeutic recommendations in clinical practice guidelines into rules for critiquing physician prescriptions? Methods and application to five guidelines." BMC medical informatics and decision making 2010 10:31 |
| 71. | Lamy JB, Duclos C, Hamek S, Beuscart-Zéphir MC, Kerdelhué G, Darmoni S, Favre M, Falcoff H, Simon C, Pereira S et al. "Towards iconic language for patient records, drug monographs, guidelines and medical search engines." Studies in health technology and informatics 2010 160:156-60 |
| 2009 |
| 72. | Toussi M, Lamy JB, Le Toumelin P, Venot A "Using data mining techniques to explore physicians' therapeutic decisions when clinical guidelines do not provide recommendations: methods and example for type 2 diabetes." BMC medical informatics and decision making 2009 9:28 |
| 73. | Falcoff H, Benainous O, Gillaizeau F, Favre M, Simon C, Desfontaines E, Lamy JB, Venot A, Seroussi B, Bouaud J et al. "Développement et étude d’impact d’un système informatique de tableaux de bord pour le suivi des pathologies chroniques en médecine générale" Pratiques et organisation des soins 2009 40:177-189 |
| 2008 |
| 74. | Lamy JB, Venot A, Bar-Hen A, Ouvrard P, Duclos C "Design of a graphical and interactive interface for facilitating access to drug contraindications, cautions for use, interactions and adverse effects." BMC medical informatics and decision making 2008 8:21 |
| 75. | Lamy JB, Duclos C, Bar-Hen A, Ouvrard P, Venot A "An iconic language for the graphical representation of medical concepts." BMC medical informatics and decision making 2008 8:16 |
| 76. | Lamy JB, Ellini A, Ebrahiminia V, Zucker JD, Falcoff H, Venot A "Use of the C4.5 machine learning algorithm to test a clinical guideline-based decision support system." Studies in Health Technology and Informatics 2008 136:223-8 |
| 77. | Lamy JB, Duclos C, Rialle V, Venot A "Vers une méthodologie rigoureuse de conception des langages graphiques s'appuyant sur les sciences cognitives." Revue d'Intelligence Artificielle 2008 22:265-280 |
| 78. | Lamy JB, Duclos C, Rialle V, Venot A "Quelle méthodologie tenant compte des sciences cognitives pour la conception des langages graphiques ?" Revue d’intelligence artificielle (RIA) 2008 22:265-280 |
| 2005 |
| 79. | Lamy JB, Duclos C, Rialle V, Venot A "Which Graphical Approaches should be Used to Represent Medical Knowledge?" Studies in health technology and informatics 2005 116:719-24 |
| 2003 |
| 80. | Rialle V, Lamy JB, Noury N, Bajolle L "Telemonitoring of patients at home - a software agent approach." Computer Methods and Programs in Biomedicine 2003 72:257-268 |
| 81. | Rialle V, Noury N, Bajolle L, Lamy JB, Virone G, Duchêne F, Moha N, Demongeot J "Le concept d’Habitat Intelligent pour la Santé: considérations techniques et scientifiques pour un service médico-social" Revue de Gériatrie 2003 28:403-416 |
Publications de type "Brevet"
| 2007 |
| 82. | Lamy JB, Duclos C, Venot A "Graphical representation of medical knowledge (EP 2018620 A1)" 2007 |
| 2006 |
| 83. | Lamy JB, Duclos C, Venot A "Graphical representation of medical knowledge (US20090265188)" 2006 |
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